Home>Publications
Publications

 

  2008
Jay A Brandes, George D. Cody, Douglas Rumble, Paul Haberstroh, Sue Wirick, Yves Gelinas. Carbon K-edge XANES spectromicroscopy of natural graphite. 2008. Carbon 46:1424–1434.
Jahnke, R. A., J. R. Nelson, M. E. Richards, C. Y. Robertson, A. M. F. Rao, and D. B. Jahnke Benthic primary productivity on the Georgia midcontinental shelf: Benthic flux measurements and high-resolution, continuous in situ PAR records. J. Geophys. Res., 2008 113, C08022, doi:10.1029/2008JC004745.
Köster M, Krause C, Paffenhöfer GA
Time-series measurements of oxygen consumption of copepod nauplii.
MEPS 2008 353:157-164.
Marco Uttieri, Gustav-Adolf Paffenhöfer and Maria Grazia Mazzocchi
Prey capture in Clausocalanus furcatus (Copepoda: Calanoida). The role of swimming behaviour. Marine Biology 153(5): 925-935.
Jerry D. Wiggert, Eileen E. Hofmann, and Gustav-Adolf Paffenhöfer
A modelling study of developmental stage and environmental variability effects on copepod foraging.ICES Journal of Marine Science: Journal du Conseil Advance Access published on February 25, 2008
ICES J. mar. Sci. 2008 65: 379-398; doi:10.1093/icesjms/fsm193
Dale, V.H. and 21 others including J. G. Sanders. Enhancing the ecological risk assessment process. Integrated Environ. Assess. Management 4: 306–313.
Sascha F. Percent, Marc E. Frischer, Paul A. Vescio, Ellen B. Duffy, Vincenzo Milano, Maggie McLellan, Brett M. Stevens, Charles W. Boylen, and Sandra A. Nierzwicki-Bauer. Bacterial Community Structure of Acid-Impacted Lakes: What Controls Diversity? Applied and Environmental Microbiology Mar. 2008, Vol. 74, No. 6 p. 1856–1868. doi:10.1128/AEM.01719-07.
Christofer Troedsson, Richard F. Lee, Tina Walters, Vivica Stokes, Karrie Brinkley, Verena Naegele, and Marc E. Frischer. Detection and Discovery of Crustacean Parasites in Blue Crabs (Callinectes sapidus) by Using 18S rRNA Gene-Targeted Denaturing High-Performance Liquid Chromatography. Applied and Environmental Microbiology, July 2008, Vol. 74, No. 14 p. 4346–4353. doi:10.1128/AEM.02132-07.
Christofer Troedsson, Richard F. Lee, Vivica Stokes, Tina L. Walters, Paolo Simonelli, and Marc E. Frischer. Development of a Denaturing High-Performance Liquid Chromatography Method for Detection of Protist Parasites of Metazoans. Applied and Environmental Microbiology, July 2008, Vol. 74, No. 14 p. 4336–4345. doi:10.1128/AEM.02131-07.
M. P. Sanderson, D. A. Bronk, J. C. Nejstgaard, P. G. Verity, A. F. Sazhin, M. E. Frischer.Phytoplankton and bacterial uptake of inorganic and organic nitrogen during an induced bloom of Phaeocystis pouchetii. Aquatic Microbial Ecology Vol. 51: 153–168. doi: 10.3354/ame01178.
Julia Diaz, Ellery Ingall, Claudia Benitez-Nelson, David Paterson, Martin D. de Jonge, Ian McNulty, Jay A. Brandes. 2008. Marine polyphosphate: a key player in geologic phosphorus sequestration . Science 2 May 320(5876): 652 - 655 DOI: 10.1126/science.1151751.
Sajdel-Sulkowska, E. M., B. Lipinski, H. Windom , T. Audhyaand and W. McGinnis. 2008. Oxidative stress in autism: elevated cerebellar 3-nitrotyrosine levels . American Journal of Biochemistry and Biotechnology 4(2): 73-84.
Townsend-Small, A, M.E. McClain, B. Hall, C. Llerena, J. L. Noruera, and J. A. Brandes . 2008.  Contributions of suspended organic matter from mountain headwaters to the Amazon River:  A one-year time series study in the central Peruvian Andes .  Geochimica et Cosmochimica Acta. 72(3): 732-740.  doi:10.1016/j.gca.2007.11.020
   
  2007
Matthew R. Gilligan, Peter G. Verity, Clayton B. Cook, Susan B. Cook, Melissa G. Booth, Marc E. Frischer. Building a Diverse and Innovative Ocean Workforce through Collaboration and Partnerships that Integrate Research and Education: HBCUs and Marine Laboratories. Journal of Geoscience Education, v. 55, n. 6, December, 2007, p. 531-540.
Brandes, J. A. , A. H. Devol, and C. Deutsch.  2007.  New developments in the marine nitrogen cycle . Chemical Reviews 107: 577-589.
Brandes, J. A ., E. Ingall, and D. Paterson.  2007. Characterization of minerals and organic phosphorus species in marine sediments using soft X-ray fluorescence spectromicroscopy . Marine Chemistry 103 (3-4): 250-265.
Brouwer, M. and R. F. Lee .  2007.  Response to toxic chemicals at the molecular, cellular, tissue, and organismal level.  In:  The Blue Crab Callinectes sapidus  (V.S. Kennedy and L.E. Cronin, eds.), Maryland Sea Grant, College Park, Maryland, pp. 485-512.
Coolen, M. J. L., B. Abbas, J. van Bleiswijk, E. C. Hopmans, M. M. M Kuypers, S. G. Wakeham , and J. S. Sinninghe Damsté. 2007.  Putative ammonia-oxidizing Crenarchaeota thrive in suboxic waters of the Black Sea: A basin-wide ecological study using 16S ribosomal and functional genes and membrane lipids . Environmental Microbiology 9: 1001-1016.
Goutx, M., S. G. Wakeham , C. Lee, M. Duflos, C. Guigue, Z. Liu, B. Moriceau, R. Sempéré, M. Tedetti, and J. Xue.  2007. Composition and degradation of marine particles with different settling velocities in the northwestern Mediterranean Sea .  Limnology and Oceanography. 52: 1645-1654.
Henjes, J., P. Assmy, C. Klaas, P. Verity , and V. Smetacek.  2007.  Response of microzooplankton (protists and small copepods) to an iron-induced phytoplankton bloom in the Southern Ocean (EisenEx) .  Deep-Sea Research I  54: 363-384.
Jacobsen, A., A. Larsen, J. Martinez-Martinez, , P. G. Verity, and M. E. Frischer .  2007.  Susceptibility of colonies and colonial cells of Phaeocystis pouchetii (Haptophyta) to viral infection .  Aquatic Microbial Ecology 48: 105-112.
Jaeschke, A., E. C. Hopmans, S. G. Wakeham , S. Schouten and J. S. Sinninghe Damsté.  2007.  The presence of ladderane lipids in the oxygen minimum zone of the Arabian Sea indicates nitrogen loss through anammox .  Limnology and Oceanography 52: 780-786.
Kattner, G., W. Hagen, R.F. Lee, R. Campbell, D. Diebel, S. Falk-Petersen, M. Graeve, B.W. Hansen, H.J. Hirche, S.H. J ó nasd ó ttir, M.L. Madsen, P. Mayzaud, D. M ü ller-Navarra, P.D. Nichols, G.-A. Paffenh ö fer, d. Pond H. Saito, D. St ü bing, and P. Virtue.  2007.  Perspectives on marine zooplankton lipids .  Canadian Journal of Fisheries and Aquatic Sciences 64: 1628-1639. 
Larsen, J. B., M. E. Frischer , K. W. Ockelmann, L. J. Rasmussen, and B. W. Hansen.  2007.  Temporal occurrence of planktotrophic bivalve larvae identified morphologically and by single step nested multiplex PCR .  Journal of Plankton Research. 29: 423-436.    doi:10.1093/plankt/fbm027
Long, J.D., M. E. Frischer , and C. Y. Robertson . 2007.  A Phaeocystis globosa bloom associated with upwelling in the subtropical South Atlantic Bight .  Journal of Plankton Research. 29: 769-774.  doi:10.1093/plankt/fbm058
Niencheski, L. F. H., H. L. Windom , W. S. Moore, and R. A. Jahnke . 2007.  Submarine groundwater discharge of nutrients to the ocean along a coastal lagoon barrier, southern Brazil . Marine Chemistry, 106: 546-561.
Paffenhöfer, G.-A., B. F. Sherr, and E. B. Sherr.  2007.  From small scales to the big picture:  persistence mechanisms of planktonic grazers in the oligotrophic ocean.   Marine Ecology 28: 243-253. 
Peck, A.M. , J. R. Kucklick, and M. M. Schantz.  2007.  Synthetic musk fragrances in environmental standard reference materials . Analytical and Bioanalytical Chemistry 387: 2381-2388.
Power C., R. Feldner, B. Scanlon, M. Frischer , and J. Richardson.  2007.  Bacterial source tracking in the Vernon River watershed.  Proceedings of the 2007 Georgia Water Resources Conference.  University of Georgia.  March 27-29.  Available at: http://cms.ce.gatech.edu/gwri/uploads/proceedings/2007/4.6.2.pdf
Rampen, S. W., S. Schouten, S. G. Wakeham and J. S. Sinninghe Damsté.   2007.  Seasonal and spatial variation in the sources and fluxes of long chain diols and mid-chain hydroxy methyl alkanoates in the Arabian Sea . Organic Geochemistry 38: 165-179.
Rousseau, V., M.-J. Chrétiennot-Dinet, A. Jacobsen, P. Verity , and S.Whipple.  2007. The life cycle of  Phaeocystis : state of knowledge and presumptive role in ecology . Biogeochemistry 83: 29-47.
Savidge, D. K. and J. A. Austin. 2007.  The Hatteras Front: August 2004 velocity and density structure .  Journal of Geophysical Research - Oceans, 112 (C07006), doi:10.1029/2006JC003933.
Savidge, D. K. , C. R. Edwards, and M. Santana. 2007.  Baroclinic effects and tides on the Cape Hatteras continental shelf .  Journal of Geophysical Research - Oceans, 112 (C09016), doi:10.1029/2006JC003832.
Savidge, W. B. , R. A. Jahnke , J. R. Nelson , D. K. Savidge , G. Voulgaris, R. T. Short, and A. Gargett.  2007. Development of a coastal ocean benthic observatory to study sediment-water exchange processes.  In :  Chemical Pollution and Environmental Changes.  S. Tanabe, H Takeoka, T. Isobe, Y. Nishibe, eds.  Universal Academy Press, Tokyo.  pp. 383-392.
Sazhin, A. F., L. F. Artigas, J. C. Nejstgaard, and M. E. Frischer .  2007.  The c olonization of two Phaeocystis species ( Prymnesiophyceae ) by pennate diatoms and other protists: an significant contribution to colony biomass .  Biogeochemistry 83: 137-145.   doi:10.1007/s10533-007-9086-2
Stewart, G., J. K. Cochran, J. Xue, C. Lee, S. G. Wakeham , R. A. Armstrong, P. Masque, and J.C. Miquel.  2007.  Exploring the connection between 210 Po and organic matter in the northwestern Mediterranean .  Deep-Sea Research 54: 415-427.
Sommerfield, C. K., A. S. Ogston, B. L. Mullenbach,  D. E. Drake, C. R. Alexander , C. A. Nittrouer, J. C. Borgeld, R. A. Wheatcroft, and E.L. Leithold.  2007. Oceanic dispersal and accumulation of river sediment  in   Nittrouer, C.A., J. A. Austin, Jr., M. E. Field, J. H. Kravitz, J. P. M. Syvitski, and P. L. Wiberg (eds.).  Continental-Margin Sedimentation: from Sediment Transport to Sequence Stratigraphy. IAS Special Publication 37, Blackwell Publishing Ltd, Oxford, 608 p.
Townsend-Small, A., M. J. McCarthy, J. A. Brandes , L. Yang, L. Zhang, and W. S. Gardner.  2007.  Stable isotopic composition of nitrate in Lake Taihu, China, and major inflow rivers . Hydrobiologia 581: 135-140.
Townsend-Small, A., J. L. Noguera, M. E. McClain, and J. A. Brandes .  2007.  Radiocarbon and stable isotope geochemistry of organic matter in the Amazon headwaters, Peruvian Andes .  Global Biogeochemical Cycles 21, GB2029, doi:10.1029/2006GB002835
Turich, C. H., K. H. Freeman, M. A. Bruns, M. Conte, A. D. Jones, and S. G. Wakeham .  2007.  Lipids of marine Archaea:  Patterns and provenance in the water-column and sediments   Geochemica Cosmochimica Acta. 71: 3272-3291.
Van Rijssel, M., A.-C. Alderkamp, J. C. Nejstgaard, A. F. Sazhin, and P. G. Verity.  2007. Haemolytic activity of live Phaeocystis pouchetii during mesocosm blooms .  Biogeochemistry 83: 189-200.
Verity, P. G., C. P. Brussaard, J. C. Nejstgaard, M. van Leeuwe, C. Lancelot, and L. K. Medlin.  2007.  Current understanding of Phaeocystis ecology and biogeochemistry, and perspectives for future research .  Biogeochemistry 83: 311-330.
Verity, P. G., S. J. Whipple, J. C. Nejstgaard, and A.-C. Alderkamp.  2007. Colony size, cell number, carbon and nitrogen contents of Phaeocystis pouchetii from western Norway .  Journal of Plankton Research 29: 359-367.
Verity, P. G., M. J. Zirbel, and J. C. Nejstgaard.  2007.  Formation of very young colonies by Phaeocystis pouchetii from western Norway . Aquatic Microbial Ecology 47: 267-274.
Wakeham, S. G., R. Amann, K. H. Freeman, E. C. Hopmans, B. B. Jørgensen, I. F. Putnam, S. Schouten, J. S. Sinninghe Damsté, H. A. Talbot, and D. Woebken.  2007.  Microbial ecology of the stratified water column of the Black Sea as revealed by a comprehensive biomarker study Organic Geochemistry 38: 2070-2097.
Walsh, J. P.,  C. R. Alexander , T. Gerber, A. R. Orpin, and B.W. Sumners.  2007.  Demise of a submarine canyon?  Evidence for highstand infilling on the Waipaoa River continental margin, New Zealand .  Geophysical Research Letters 34: L20606, doi:10.1029/2007GL031142.
Webster, J. W., G. A. Brook, L. B. Railsback, H. Cheng, R. L. Edwards, C. R. Alexander and P.P. Reeder.  2007. Stalagmite evidence from Belize indicating significant droughts at the time of Preclassic Abandonment, the Maya Hiatus, and the Classic Maya collapse .  Palaeogeography, Palaeoclimatology, Palaeoecology 250: 1-17.
Wheatcroft, R. A., P. L. Wiberg,  C. R. Alexander ,  S. J. Bentley, D. E. Drake, C. K. Harris, and A. S. Ogston.  2007.  Post-depositional alteration and preservation of sedimentary strata in  Nittrouer, C. A., J. A. Austin, Jr., M. E. Field, J. H. Kravitz, J. P. M. Syvitski, and P. L. Wiberg (eds.).  Continental-Margin Sedimentation: from Sediment Transport to Sequence Stratigraphy. IAS Special Publication 37, Blackwell Publishing Ltd, Oxford, 608 p.
Whipple, S. J., B. C. Patten, P. G. Verity , M. E. Frischer , J. D. Long, J. C. Nejstgaard, J. T. Anderson, A. Jacobsen, A. Larsen, J. Martinez-Martinez, and S. R. Borrett.  2007.  Gaining integrated understanding of Phaeocystis spp. (Prymnesiophyceae) through model-driven laboratory and mesocosm studies .  Biogeochemistry 83: 293-309.
Windom, H. L. , W. Moore, and F. Niencheski.  2007.  Influence of groundwater discharge through a coastal sandy barrier in Southern Brazil on sea water metal chemistry.  In:  A New Focus on Groundwater-Seawater Interaction (W. Sanfot, C. Langerin. M. Polemio and P. Povinea, eds.) IAH International Commission on Groundwater.  XXI General Assembly, IUGG, Perugia, Italy, p. 180-188.
   

Skidaway Institute of Oceanography, 10 Ocean Science Circle, Savannah, GA 31411 (912) 598-2400
Copyright © 2008 Skidaway Institute of Oceanography. All rights reserved.
Contact the Webmaster.