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SkIO Seminar Series

Seminar Title: Plankton composition drives the seasonality of pathogenic vibrio species
Presented by: Jeff Turner, Institute of Ecology, University of Georgia, Athens, GA
When: Friday, Nov 14, 2008 @ 10:00 AM
Where: SkIO Library Auditorium
Summary: Vibrio cholerae, V. parahaemolyticus and V. vulnificus are important human pathogens that persist in coastal marine environments as a natural part of the microbial flora. Over a one-year period, water and plankton (63-200 and >200 μm) were collected from shellfish harvesting waters (Georgia, USA) and analyzed for the presence of total and pathogenic vibrios. Temperature, salinity and dissolved oxygen were significant drivers of Vibrio species concentrations. General linear models revealed that seasonal changes in the relative abundance of specific plankton taxa were related to concentration of Vibrio species in the plankton fractions. In the 63-200 μm fraction, every 1% increase in the relative abundance of diatoms and cyanobacteria corresponded to 16.19-fold and 28.11-fold decreases in Vibrio species concentration, respectively. In the >200 μm fraction, every 1% increase in the relative abundance of copepods corresponded to a 16.68-fold increase in Vibrio species concentration. PCR analysis confirmed that plankton composition was a driver of pathogenic vibrios. Specifically, the relative abundance of copepods in the 63-200 µm plankton was directly related to the prevalence of V. cholerae, V. parahaemolyticus and V. vulnificus, and genes associated with virulence in V. parahaemolyticus and V. vulnificus. In the >200 µm plankton, the relative abundance of sessilia and decapods was directly related to the prevalence of V. vulnificus. Our results confirm the role of temperature, salinity and dissolved oxygen in Vibrio seasonality but also highlight an important and independent role for plankton composition in explaining seasonal changes in Vibrio concentration and the prevalence of pathogenic vibrios.


SkIO Seminar Series

Seminar Title: Coastal ocean response to near-resonant sea breeze/land breeze wind forcing near the critical latitude in the Georgia Bight
Presented by: Catherine Edwards , Ph. D. student, University of North Carolina at Chapel Hill
Date: Monday, October 27, 2008
Time: 2:00 p.m.
Where: SkIO Library Auditorium
Summary: Near the critical latitude of 30 deg N or S, the local inertial frequency coincides with the diurnal, and an increased response to diurnal forcing can be observed in both the atmosphere and in the ocean. On the mid- to outer shelf of the Georgia Bight, between 29-32 deg N, non-tidal diurnal currents can exceed 25 cm/s more than 120 km offshore, and are surface-intensified, with currents in the lower layer 180 degrees out of phase with those in the upper layer. Persistent from April through October, these diurnal motions appear to be inertial oscillations (IOs) and near-inertial internal waves (NIIW), forced by sea breeze/land breeze (SBLB), which is itself near-resonance.

Observational wind and current data from 1999-2007 are analyzed from a moored array in the Georgia Bight, where linear theory predicts a maximum of SBLB magnitude and offshore extent. The structure of diurnal variability in observed and modeled wind fields compares well with the predictions of linear SBLB theory, with the greatest SBLB winds near 30 deg N. SBLB is a source of shelf-wide wind forcing near the resonant frequency; SBLB winds are found to exceed 1-2 m/s at least 250 km offshore, a distance almost an order of magnitude greater than that found at other latitudes.

Though the SBLB winds decrease with distance offshore, the coastal ocean response increases as the presence of stratification increases the efficiency of the wind forcing -- preliminary analysis of surface currents from HF radar suggests continued increase past the shelf break into the Gulf Stream. A month-long glider deployment in August 2006 allows for a closer examination of the role of stratification in determining the magnitude and vertical structure of the SBLB-forced currents, and reveals that the pycnocline contains the return flow, rotating 180 deg out of phase with surface currents. This unusual vertical structure has significant implications for mixing, as the shelf of the Georgia Bight appears to trap near-inertial energy input from the wind, enhanced near the critical latitude for diurnal/inertial resonance.


SkIO Seminar Series

Seminar Title: Assessing Biodiversity/genetic Diversity in the Marine Phytoplankton
Presented by: Linda K. Medlin, Observatoire Océanologique de Banyuls-sur-mer, Laboratoire Arago, 66651 Banyuls-sur-mer, France
Date: Tuesday, October 28
Time: 3:00 p.m.
Where: SkIO Library Auditorium
Summary: Marine phytoplankton are highly dispersed with large population sizes and are often considered to be homogenous over their entire range. Thus using this definition, one would predict that everything is everywhere for these microbes. However, recent molecular analyses have shown both spatial and temporal compartmentalization in phytoplankton communities, thus calling into question the idea that everything is everywhere. Molecular techniques can now address many important questions concerning taxonomic affinity, genetic diversity, gene flow and dispersal, and physiological states, of which all have an impact on the assessment of biodiversity and production in all aquatic systems. When comparing genetic diversity with physiological adaptation we see how the phytoplankton has maintained ecosystem resilience. Examples are presented to document the range of genetic diversity and population fragmentation that has been reported in the phytoplankton and a hypothesis as to how this relates to species evolution on a geological time scale is provided.


SkIO Seminar Series

Seminar Title: GIS-Based Coastal Change Applications.
Presented by: Brian Bossak, PhD Assistant Professor, Dept. of Geology and Geography, Georgia Southern University
Date: Friday, October 24
Time: 11:00 a.m.
Where: SkIO Library Auditorium
Summary: Forecasting aspects of coastal change due to global warming is fraught with uncertainty. Various parameters associated with coastal living, such as the relative impact of hurricanes and nor’easters, recreational water quality, and the abundance and health of harvested seafood are all likely to change as oceans warm and expand at the same time as development intensifies near the coastal zone. This leads to myriad opportunities to model and predict future impacts from these parameters. GIS brings together datasets based on many formerly independent disciplines in order to construct cartographic (static) or spatio-temporal models that are applicable to issues in the coastal zone. In this brief talk, I discuss the development of a primitive GIS-based coastal change model which is a step forward in conceptualizing changes to coastlines following hurricanes and nor’easters. This portion of the talk will be followed by two research interests that may utilize Geospatial Analysis in an investigative role: coastal zone water quality assessment and environmental pollutant/seafood interaction.

SkIO Seminar Series

Seminar Title: Autonomous Underwater Gliders: New Tools to Explore the Ocean and Save the DSCN0750 Whales.
Presented by: Dr. David Fratantoni, Associate Scientist, Autonomous System Laboratory, Department of physical oceanography, Woods Hole Oceanographic Institution. B.S. from Virginia Tech in Aerospace and Ocean Engineering, Ph.D. from U. of Miami in Meteorology and Physical Oceanography
Date: Friday, September 26, 2008
Time: 10:00 a.m.
Where: Skidaway Institute Library Auditorium
Summary: High endurance autonomous underwater vehicles are revolutionizing the study of ocean physics, optics, biology, and acoustics. In this talk I will review the development of the underwater glider, its enabling technologies, and recent oceanographic applications emphasizing the simultaneous use of multiple vehicles.


SkIO Seminar Series
Seminar Title: The Western Antarctic Peninsula Ecosystem: Physical and Biological Controls on Marine Populations
Presented by: Marina Marrari, Ph.D. , College of Marine Science, University of South Florida
Date:
Thursday, September 18, 2008
Time: 3:00 pm
Where: SkIO Library Auditorium
Summary:
As part of the US Southern Ocean GLOBEC Program, the zooplankton community of Marguerite Bay, in the western Antarctic Peninsula region, was investigated in relation to variability in chlorophyll and sea ice dynamics using a combination of satellite remote sensing techniques and plankton net data. Climatology data of SeaWiFS chlorophyll showed that the Bellingshausen Sea and Marguerite Bay usually had denser and more persistent phytoplankton blooms compared with northern regions. These predictable blooms could provide the Antarctic krill, /Euphausia superba/, with the food required for successful reproduction and larval survival. Unusually high krill reproduction in 2000/2001 was coincident with above-average chlorophyll concentrations throughout the study area and was followed by the largest juvenile recruitment since 1981. Interannual variability in the species composition of the fall zooplankton community of Marguerite Bay was linked to changes in the environmental conditions during summer.

SkIO Seminar Series
Seminar Title: Bentho-Pelagic Coupling on the Antarctic Shelf
Presented by: Carrie J. Thomas, Ph.D., Research Assistant Professor and Director of Undergraduate Programs, Marine, Earth and Atmospheric Sciences, North Carolina State University.
Date: Friday, September 19
Time: 3:00 pm
Where: SkIO Library Auditorium
Summary:
Based on 5 cruises to the Western Antarctic Peninsula between November 1999 and March 2001, our research program (called FOODBANCS – Food for Benthos on the ANtarctic Continental Shelf) has acquired strong evidence that the organic carbon rain rate to the seafloor, macrofaunal and microbial abundances in the sediments, and microbial degradation rates of POC in the seabed are remarkably uniform despite large spatial and temporal variances in primary production in the overlying water column. We are currently mid-way through a follow-up study which expands the study area further north to 63°S and south to 68 °S. Over two years (2008-2009) we are quantifying temporal variations in the biomass, community structure, respiration and feeding dynamics of the benthos and as well as in the determining rates of seabed cycling and burial of organic carbon and nitrogen.

SkIO Seminar Series
Seminar Title: Mapping Wind Direction in the South Atlantic Bight with HF Radar
Presented by: Matthew Archer
Date: Friday, August 29
Time: 10:00 am
Where: SkIO Library Auditorium
Summary:
High frequency radar is a powerful instrument in the synoptic observation of coastal circulation; it can provide near real-time data of current velocity fields, wave height and wind direction at a scale and resolution unmatched by traditional oceanographic instruments.

For this summer internship, I have spent 2 months assisting Dr Dana Savidge with data acquisition, processing and some analysis of HF WERA radar data, specifically wind direction data collected between April
2006 to May 2007. The data was processed using FORTRAN, Shell Scripts and Matlab. Wind direction at 2 observation stations, the Grays Reef buoy and the Navy R2 tower, were compared to in-situ anemometer data, with complex correlation co-efficients calculated to get an idea of the deviation between observations and accuracy of the WERA data.

This presentation will provide a short introduction to HF radar, and give an overview of the data I have been working on at Skidaway over the past 2 months.


SkIO Seminar Series
Seminar Title: Vibrio parahaemolyticus Mutators: Insights into Genetic Diversification of an Opportunistic Marine Pathogen
Presented by:
Dr. Patricia Sobecky,
Associate Professor of Biology,
Georgia Institute of Technology

Date: Tuesday, 12 August 2008
Time: 3:00 PM
Where: SkIO Library Auditorium
Summary:
In order to balance genomic stability with the flexibility to adapt to environmental stress, bacteria have evolved molecular mechanisms that increase cellular mutability. The methyl-directed mismatch repair system (MMR) is an evolutionarily conserved process that corrects replication errors in eukaryotes and prokaryotes. Inactivation or loss of MMR also results in the emergence of ‘mutator’ strains characterized by high spontaneous mutation frequencies and increased frequency of recombination. The Vibrionaceae are a diverse family of marine bacteria that include pathogens of animals and humans, and many less pernicious species that are free-living heterotrophs and commensals of marine fauna. Currently, little is known regarding the role of mutator phenotypes for the diversification of natural populations of opportunistic Vibrio pathogens in marine environments. In this talk I will present data demonstrating a higher frequency of mutators among V. parahaemolyticus strains obtained from environmental sources. Inactivation of the MMR gene mutS caused increased antibiotic resistance and phase variation resulting in translucent colony morphologies. An increased nucleotide diversity and recombination in mutS and rpoB alleles from mutator strains indicated a significant contribution of the mutator phenotype to the evolution of select genes. Our findings indicate inactivation of MMR in natural populations of V. parahaemolyticus results in significant increases in genetic and phenotypic diversity, which is reflected in the diversity of V. parahaemolyticus environmental populations.

SkIO Seminar Series

Seminar Title: Ossabaw Barrier Island Observatory
Presented by: Dr. Herb Windom, Professor Emeritus, Skidaway Institute of Oceanography
Date: Friday, 8 August 2008
Time: 10 am
Where: SkIO Library Auditorium
Summary: Skidaway Institute of Oceanography and the Ossabaw Island Foundation have received $200,000 in grants from the Georgia Power Corporation and the Georgia Research Alliance to build a network of sensors on the remote coastal Georgia barrier island. The goal is to allow educators, students and scientists to study the island and monitor changes in the environment from off-island locations.


SkIO Seminar Series

Seminar Title: SkIO Intern Seminar

Presented by:
Channell West
Spelman University
Matilda Young
Clark Atlanta University
Diamond Carr
Clark Atlanta University
Jolill Ross
Spelman University
Ashley Shannon
Clark Atlanta University
Date: Wednesday, July 30, 2008
Time: 10:00 am
Where: SkIO Auditorium
Summary:

Cultivation of Gracilaria
Chanelle West - Spelman University

Sushi is a growing industry in the United States that can be economically stimulating if done on a commercial scale. Our research focuses on the parameters to successfully culture Gracilaria. Gracilaria is an edible seaweed with a profitable market so we are testing its viability as a biofilter in fish tanks. Our experiments include three different approaches at culturing Gracilaria. These include using black sea bass waste water in a recirculating system, a flow through seawater tank, and aquariums with varying nutrients and light. We believed that Gracilaria grown in sea bass water or in aquariums with no light would grow best. Our data has shown that Gracilaria can be cultured successfully by maintaining a temperature around 25° C, plenty of shade, continuous aeration, a pH of 8.5, and salinity of 34 parts per million.

Gracilaria Use as a Bio-Filter
Diamond Carr - Clark Atlanta University

The objective of the experiment is to observe the growth rates of Graciliaria cultured in variable environments. Optimum growth of Graciliaria can make a beneficial profit for commercial sales of seaweed. Graciliaria was observed in aquariums, flow through tanks, and a sea bass filter system. Twelve aquariums were observed with varying light and nutrient parameters. The flow through tanks circulate seawater from the river and the seaweed was suspended in crates.

The Graciliaria is stimulated by the absorption of nutrients from the sea bass waste, which in turn reduces the water toxicity for the sea bass. Amongst the several parameters tested, the Graciliaria showed best growth in the shaded aquarium medium.

Business Plan for Black Sea Bass
Matilda Young - Clark Atlanta University

The demand for seafood, including sushi, is increasing nationwide. Acknowledging this fact, Skidaway Institute of Oceanography has adapted a system of raising Black Sea Bass from fry to adult size using a diet of tilapia. I will discuss how raising fish from fry to market size will be a profitable business venture as well as the organic vegetables that can be aquaponically grown in conjunction. Using the information collected on both markets, I will develop a business plan which to include marketing, operations and financial information. Details needed to operate efficiently in this market will also be provided in the business plan. Not only will I provide information on the fish market but I will also answer the question, why we believe our fish should be considered organic.

Algae into Bio-Diesel
Jolill Ross - Spelman University

The price of gas and biodiesel are quickly increasing day by day, and alternatives are being researched to find new sources of fuel. It has been discovered that through an extensive process, corn can be converted into biodiesel as well as ethanol. Using this principal, we designed an experiment to create biodiesel and ethanol using algae as our medium. We extracted carbohydrates and lipids, through filtration, from the single-cell algae, which could then be converted to biodiesel as well as fermented the filamentous algae to see if it would yield a high percentage of ethanol. Our results showed a 75% yield of carbohydrates from the filamentous algae and a 50% yield of carbohydrates from the single-cell algae. Also, we discovered that there was only a 3% yield of lipids for the filamentous algae, and a 6% yield of lipids from the single-cell algae. From these test results, we hypothesize that it will be possible to convert algae into biodiesel and ethanol.

Algae, a potential Bio-Fuel and Lucrative Business
Ashley Shannon - Clark Atlanta University

In response to the rising prospective profit and interest for bio-fuel, we designed a research project to look at the probability of profit that could be made from algae produced in Skidaway Institute of Oceanography’s tilapia raceways. My preliminary hypothesis includes a profit plan for use of the algal water produced in the tilapia aquaculture. Since the algae is a byproduct of the fish production, costs should remain fairly low. Through-out the past couple weeks, I have researched variable and fixed costs for this bio-fuel project as well as assisted in the research, finding the amount of carbohydrates and lipids available. Consequently we found that the concentration of lipids were low; however, there is a high percentage of carbohydrates, giving the option for fermentation to produce ethanol.


SkIO Seminar Series

Seminar Title: Great Minds, the Parallel Lives of Great Apes and Dolphins
Presented by: Maddalena Bearzi, Ph.D., Ocean Conservation Society, President
Date: Thursday, June 5, 2008
Time: TBA
Where: SkIO library auditorium
Summary: Maddalena Bearzi is the President and Co-founder of the Ocean Conservation Society and is a visiting scholar in the Departments of Anthropology and Biological Sciences, at the University of California, Los Angeles . She has studied dolphins and whales in California and different parts of the world. She has just published a new book “Great Minds, the Parallel Lives of Great Apes and Dolphins” which will be the subject of her talk.
Additional information can be obtained at:
http://www.hup.harvard.edu/catalog/BEABEA.html  (Her book)
http://www.home.earthlink.net/~mbearzi/  (Her Web site.)


SkIO Seminar Series
Student Seminar/Thesis Defense
The ecological significance of nasA diversity in marine heterotrophic bacteria

Seminar Title: The ecological significance of nasA diversity in marine

heterotrophic bacteria

Presented by: Denis Wafula, M.Sc. Student,

Savannah State University

When: Tuesday, March 25, 2008 @ 8:30 AM

Where: Marine Biology Building, Savannah State University

 
 
 
 
SkIO Seminar Series
How native biota and physical environmental attributes shape the success of invasive species
Seminar Title: How native biota and physical environmental attributes shape the success of invasive species

Presented by: Dr. Jeb Byers, Associate Professor, Zoology Department, University of New Hampshire

When: Thursday, January 24, 2007 @ 3:00 PM

Where: SkIO Library Auditorium

Summary: Although invasive species are a leading conservation concern, quantitative and predictive approaches to dealing with them are few. Dr. Byers will present two detailed empirical studies which demonstrate mechanisms which hinder and promote marine invasion. In particular these studies focus on the roles of physical biological coupling and marine reserves. In conclusion, Dr. Byers will present a general theoretical model that quantifies how spread and invasion are determined in advective environments. This theoretical framework is applied to several real world examples and suggests a novel way that climate change might affect invasibility in coastal oceans.


SkIO Seminar Series
Topography, topology and surface processes of a South Carolina salt marsh

Seminar Title: Topography, topology and surface processes of a South Carolina salt marsh

Presented by: Dr. Raymond Torres, Associate Professor, Department of Geological Sciences, University of South Carolina

When: Friday, January 18, 2008 @ 10:00 AM

Where: SkIO Library Auditorium

Summary: Tidal creeks and creek networks are ubiquitous features of SE salt marshes, and salt marsh landscapes around the world. The development of tidal creek systems is a focus of intense research driven by the need to understand the impact climate change along the low relief coastline. In this talk Dr. Torres will characterize the 1-D, 2-D and 3-D structure of a section of intertidal salt marsh in North Inlet, SC and use those analyses to demonstrate that topographic variations in a salt marsh exert local and large scale control in over-marsh currents and sediment transport processes. Overall, Dr. Torres will show that the very subtle relief of salt marsh landscapes should not be ignored or oversimplified.

 

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